Sequences / structures

• 3D Blocks
• 3D-Genomics
• ASTRAL
• Blocks
• CUBIC
• DSSP (Database of secondary structures)
• FSSP
• GeneCards
• HSSP (Homology-derived secondary structures)
• HUGO Gene Nomenclatures
• I.M.A.G.E. Consortium
• InterPro
• IPI (International Protein Index)
• MIPS
• NCBI COGs
• NCBI dbEST
• NCBI GenBank
• NCBI Tools
• NCBI LocusLink
• NCBI OMIM
• NCBI RefSeq
• NCBI UniGene
• NDB (Nucleic Acids Databank)
• OWL
• PIR (Protein Information Resource)
• Pfam
• ProDom (Protein Domain)
• PROSITE
• PRINTS
• PDB at RCSB
• PDBsum at EBI
• Proteome Databases
• SCOP
• SMART
• Superfamily Genome Assignments
• Swiss-Prot / UniProt (EBI)
• Swiss-Prot (ExPasy)

• Codon Usage Database
• ExInt (Exon-intron database)
• Eukaryotic Promoter Database
• Gene Ontology
• Giri repetitive elements
• GPCRDB - G Protein Coupled Receptor
• HERVd (human endogenous retroviruses)
• ISIS - the intron database
• SCOR (Struture Classification of RNA)
• TIGR
• TRANSFAC database
• ChloroP
• PSORT
• SignalP
• TargetP

Tools

• EMBOSS
• PredictProtein
• Protein translation at EBI
• Protein translation Expasy
• RepeatMasker

Websites

Programming

• Perl.org
• CPAN
• BioPerl
• BioPython
• BioJava
• MySQL.org
• Matlab Bioinfo tools
• Slashdot

Conferences & Orgs

• Bioinfomatics.org
• Bioinform.com
• ISCB - Int'l Society for Comp. Biol.
• Pacific Biocomputing Symposium
• RECOMB
• IEEE Bioinformatics
• SMBE